Hello,
I am trying to run TRACE with my own DNase-seq dataset (ENCFF274YGF). However, I keep getting the following error:
Numerical Recipes run-time error... allocation failure in ivector() ...now exiting to system...
File sizes / line counts:
seq.txt 21,569,212 lines count.txt 21,450,486 lines slope_2.txt 21,450,486 lines bed3 118,721 lines
When I run TRACE with the provided example data (E2F1), it works fine.
But with my dataset, it fails immediately with the above memory allocation error.
I tried reducing --thread to 1 and lowering --max-inter, but the problem remains.
Hello,
I am trying to run TRACE with my own DNase-seq dataset (ENCFF274YGF). However, I keep getting the following error:
Numerical Recipes run-time error... allocation failure in ivector() ...now exiting to system...File sizes / line counts:
seq.txt 21,569,212 lines count.txt 21,450,486 lines slope_2.txt 21,450,486 lines bed3 118,721 linesWhen I run TRACE with the provided example data (E2F1), it works fine.
But with my dataset, it fails immediately with the above memory allocation error.
I tried reducing --thread to 1 and lowering --max-inter, but the problem remains.