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Achievements

Achievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: Quickdraw

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@BU-ISCIII @BIPLAT-CIBERINFEC

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Daniel-VM/README.md

Who I Am 👋

Hi, I'm Daniel 🧬

Bioinformatician focused on pathogen surveillance, reproducible workflows and bioinformatics infrastructure.

  • 🔭 Building Nextflow pipelines, APIs and HPC-based bioinformatics platforms.
  • 🧪 Interested in public health genomics, automation and scalable data analysis.
  • 💬 Ask me about bioinformatics, Nextflow, HPC, Python or pathogen surveillance.

🛠️ Tech Stack

Python R Bash
Nextflow Django Docker
Linux HPC Git

🧬 Main Interests

Bioinformatics Public Health Genomics Pathogen Surveillance Reproducible Workflows

Pinned Loading

  1. nf-core/modules nf-core/modules Public

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow 419 1.1k

  2. bacass bacass Public

    Forked from nf-core/bacass

    Simple bacterial assembly and annotation pipeline

    Nextflow

  3. BU-ISCIII/relecov-tools BU-ISCIII/relecov-tools Public

    set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload t…

    HTML 7 28

  4. BIPLAT-CIBERINFEC/pathocore-api BIPLAT-CIBERINFEC/pathocore-api Public

    Core API for managing and serving data for pathogen platforms and related services.

    Python 2

  5. BU-ISCIII/introduction_to_hpc BU-ISCIII/introduction_to_hpc Public

    In this training course you will find theory and practice material for introducing yourself to the basics of high-performance computing (HPC) environment.

    HTML 1 4

  6. BU-ISCIII/BU-ISCIII BU-ISCIII/BU-ISCIII Public

    Our Wiki and main public documentation repository.

    7 11