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Convert setPheno and crossing functions to S4 generics; add Pop/MultiPop methods, centralize internals, and update docs#20

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Convert setPheno and crossing functions to S4 generics; add Pop/MultiPop methods, centralize internals, and update docs#20
mghaderizefreh wants to merge 3 commits into
HighlanderLab:develfrom
mghaderizefreh:genericPop

Merge branch 'devel' into genericPop

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