FRACTALSIM is a multi-scenario genome-wide medical population genetics simulation framework. FractalSIM has the capability to accurately mimic and generate genome-wide data under various genetic models on genetic diversity, genomic variation affecting diseases and DNA sequence patterns of admixed and/or homogeneous populations.
run and was tested on python version 2.7.* Ensure you have the below python 2.7* packages numpy subproces loggings warnings itertools
Mugo, J.W., Geza, E., Defo, J., Elsheikh, S.S., Mazandu, G.K., Mulder, N.J. and Chimusa, E.R., 2017. A multi-scenario genome-wide medical population genetics simulation framework. Bioinformatics, 33(19), pp.2995-3002.
Mugo, J.W (jacquilinemugo@aims.ac.za) and scientific questions (echimusa@gmail.com)
Command line usage: FractalSIM.py.py eg: python fractalsim.py parancFractal.txt