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Copilot/prepare repo for joss submission#25

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tmaier-kettering merged 5 commits into
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copilot/prepare-repo-for-joss-submission
May 14, 2026
Merged

Copilot/prepare repo for joss submission#25
tmaier-kettering merged 5 commits into
mainfrom
copilot/prepare-repo-for-joss-submission

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Copilot AI and others added 5 commits May 14, 2026 15:18
- Rewrite paper.md with correct JOSS front matter (affiliations list,
  bibliography field, author affiliation index), accurate description
  of all software features (live/batch, single/multi-label, keyword
  extraction, reliability analysis, correlogram, data prep), inline
  citations, and clean acknowledgments
- Create paper.bib with BibTeX bibliography (Saldaña, Cohen, Mayring,
  Brown et al., OpenAI GPT-4, McKinney/pandas, Hunter/matplotlib)
- Create CITATION.cff for software citation
- Fix README.md license section to reference MIT License explicitly

Agent-Logs-Url: https://github.com/tmaier-kettering/CodebookAI/sessions/15e543d2-37b8-4f1d-a3f1-b7332f228460

Co-authored-by: tmaier-kettering <109093855+tmaier-kettering@users.noreply.github.com>
Agent-Logs-Url: https://github.com/tmaier-kettering/CodebookAI/sessions/15e543d2-37b8-4f1d-a3f1-b7332f228460

Co-authored-by: tmaier-kettering <109093855+tmaier-kettering@users.noreply.github.com>
Removed redundant text about LLM capabilities and CodebookAI.
Removed multiple references to papers from the bibliography.
@tmaier-kettering tmaier-kettering merged commit 654009d into main May 14, 2026
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@tmaier-kettering tmaier-kettering deleted the copilot/prepare-repo-for-joss-submission branch May 14, 2026 15:35
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2 participants