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RShiny_MicroclimGuide

RShiny_Microclim is an interactive shiny app that facilitates the selection of microclimate datasets. The app compares 8 different datasets (SCAN, ERA5-Land, GLDAS, gridMET, NOAA NCDC, microclim, microclimUS, USCRN) both temporally and spatially. Once users selects a dataset, we offer this user guide, which explains how to access and download each dataset.

The app complements this manuscript: Meyer, Abigail V., Yutaro Sakairi, Michael R. Kearney, and Lauren B. Buckley. 2023. “A Guide and Tools for Selecting and Accessing Microclimate Data for Mechanistic Niche Modeling.” Ecosphere14(4): e4506.

This is a reconfiguration of a previous docker Azure version.

Prerequisites for opening in Rstudio

Git and Rstudio (Instructions)

Using RShiny_Microclim

  • Opening in Rstudio:
    Click on "Code" on the top right to copy the link to this repository.
    Click File, New Project, Version Control, Git
    Paste the repository URL and click Create Project.

Contributing to RShiny_Microclim

To contribute to RShiny_Microclim, follow these steps:

  1. Fork this repository.
  2. Create a branch: git checkout -b <branch_name>.
  3. Make your changes and commit them: git commit -m '<commit_message>'
  4. Push to the original branch: git push origin <project_name>/<location>

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Microclimate selection app and guide

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